[Bioperl-l] Bio::Restriction::Enzyme

Brian Osborne bosborne11 at verizon.net
Thu Oct 26 12:37:06 EDT 2006


Nathan,

Perhaps because most restriction sites are palindromes. Anyway, I added
tests for palindromic() and is_palindromic() where the site is not a
palindrome, these tests pass (t/RestrictionAnalyis.t).

Brian O.


On 10/26/06 12:13 PM, "Nathan Haigh" <n.haigh at sheffield.ac.uk> wrote:

> I'm in the middle of writing some code that uses
> Bio::Restriction::Analysis and Bio::Restriction::Enzyme. I'm using
> Bioperl from HEAD.
> 
> I seem to find that $enzyme->is_palindromic always seems to return true.
> Can anyone verify this? If needs be, I can send some code.
> 
> Thanks
> Nathan
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