[Bioperl-l] StandAloneFasta.t bioperl-run tests

Chris Fields cjfields at uiuc.edu
Fri Oct 27 12:15:00 EDT 2006


Nathan,

The test fails you posted on the wiki seem to indicate that using the
wrapper works but the order of the returned hits is off.  Does the order of
the returned hits match the actual FASTA report order?  If it does then the
tests need to be fixed in a way to make it more flexible, to account for
some data 'fuzziness' due to variations in output based on different
versions.  

Chris

Christopher Fields
Postdoctoral Researcher - Switzer Lab
Dept. of Biochemistry
University of Illinois Urbana-Champaign 




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