[Bioperl-l] NEED HELP URGENTLY

Brian Osborne osborne1 at optonline.net
Fri Sep 1 11:41:13 EDT 2006


Neeti,

http://www.bioperl.org/wiki/HOWTO:SearchIO#Sorting

The behavior you're seeing is the intended behavior of the parser.


Brian O.


On 9/1/06 6:57 AM, "neeti somaiya" <neetisomaiya at gmail.com> wrote:

> Hi,
> 
> I have written a BLAST parser script, and when I try running it on a BLASTN
> ouput file to get the first 10 hits, it gives me 10 random hits, and not the
> first 10 hits.Can anyone give me any idea what could be the cause of this
> behaviour of the parser.
> Please find attached my parser script and the input and output files. The
> script can be ran as : perl parserMethod.pl 10, where 10 is the number of
> hits expected in the parsed output file.




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