[Bioperl-l] t/SeqIO.t -- improvements?

Jay Hannah jay at jays.net
Thu Sep 7 13:37:24 EDT 2006

So if I understand t/SeqIO.t correctly it reads (for example) 


and writes

and if nothing explodes the test passes.


Wouldn't it be better if:
(1) fasta.out was generated to contain *all* sequences, not just the first.
(2) a test was added to verify that fasta.out exactly matches test.fasta (diff is blank).

Or have I misunderstood something? 

Are patches welcome? Shall I submit the patch to this mailing list or elsewhere? Should I worry about Windows compatibility?



More information about the Bioperl-l mailing list