[Bioperl-l] t/SeqIO.t -- improvements?

Jay Hannah jay at jays.net
Thu Sep 7 13:37:24 EDT 2006


So if I understand t/SeqIO.t correctly it reads (for example) 

   t/data/test.fasta

and writes
  
   t/data/fasta.out

and if nothing explodes the test passes.

...

Wouldn't it be better if:
(1) fasta.out was generated to contain *all* sequences, not just the first.
(2) a test was added to verify that fasta.out exactly matches test.fasta (diff is blank).

Or have I misunderstood something? 

Are patches welcome? Shall I submit the patch to this mailing list or elsewhere? Should I worry about Windows compatibility?

Thanks,

j



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