[Bioperl-l] Retrieving Gene Info from NCBI

Ryan Golhar golharam at umdnj.edu
Mon Sep 11 13:40:03 EDT 2006


I'm not sure this is possible but I'll ask anyway:

NCBI contains the Genomic region information in the Gene database for
every known gene.  For instance, if you search NCBI for XM_547879, there
is 1 entry in "Gene".  Follow that entry and it takes you to
LOC490757...follow that and it takes you to the Gene db entry.  Under
genomic regions, etc, it shows the exons, intron, and UTRs.  How can I
extract this information from Entrez Gene?  Is it possible with Bioperl?




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