[Bioperl-l] Bio::Location::Split question
cjfields at uiuc.edu
Mon Sep 18 21:04:08 EDT 2006
I'll take a look at it. There's a related bug report already in
Bugzilla that's related to this but I'll add a new one that's more
directly related to the issue here.
I'll give your test a try to see if it makes a difference.
On Sep 18, 2006, at 5:26 PM, Hilmar Lapp wrote:
> On Sep 18, 2006, at 5:55 PM, Chris Fields wrote:
>> However, if I take the two examples above, run them through
>> FTLocationFactory, then use to_FTstring() to get the feature
>> string, this is
>> what I get:
> So this looks like a bug, right? The correct result would be if
> both yielded the same strings, or syntactically equivalent strings.
> The two above are neither identical nor syntactically equivalent.
> Another test is if you set a feature location from either string
> and then request the sub-sequence, the resulting sequence should be
> identical given syntactically equivalent location specifications.
> Do you want to file (and possibly address?) this?
> : Hilmar Lapp -:- Durham, NC -:- hlapp at gmx dot net :
Lab of Dr. Robert Switzer
Dept of Biochemistry
University of Illinois Urbana-Champaign
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