[Bioperl-l] Failed tests for FeatureIO

Sendu Bala bix at sendu.me.uk
Mon Sep 25 08:52:38 EDT 2006


Torsten Seemann wrote:
> Chris,
> 
>> I am getting failed tests for FeatureIO.t on make test using bioperl- 
>> live on Mac OS X (10.4.7, perl 5.8.6):
>> pyr:~/src/bioperl-live cjfields$ perl -I. -w t/FeatureIO.t
>> ------------- EXCEPTION: Bio::Root::Exception -------------
>> MSG: Invalid protein count
>> STACK: Error::throw
>> STACK: Bio::Root::Root::throw Bio/Root/Root.pm:331
>> STACK: Bio::FeatureIO::ptt::_initialize Bio/FeatureIO/ptt.pm:147
>> STACK: Bio::FeatureIO::new Bio/FeatureIO.pm:266
>> STACK: Bio::FeatureIO::new Bio/FeatureIO.pm:286
>> STACK: t/FeatureIO.t:189
>> -----------------------------------------------------------
> 
> Hmmm, I committed that module last week. I just did a fresh complete checkout 
> of current CVS, and all the tests pass fine for me on Linux 2.6 + Perl 5.8.5 ?

They also pass for me under linux, but I confirm the problem under Mac 
OS X 10.4.7 perl 5.8.6.


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