[Bioperl-l] bioperl::db

Bernd Mueller bernd at kirx.de
Sat Apr 28 10:36:07 EDT 2007


I followed those instructions on bioperl.org for installing bioperl via 
cpan. But actually it is impossible for me to install the bioperl::db 

How does this work?

Moreover none of these Birney distribution are installable on my system. 
After typing cpan> install BIRNEY/bioperl-x.x.x.x, the tests always 
fail. So I have to install the CRAFFI bundle but it does not seem that 
Bio::DB module is included in this bundle because my programs using that 
module do not work.

Help would be appreciated :)



cpan[6]> d /bioperl/
Distribution    BIRNEY/bioperl-1.2.1.tar.gz
Distribution    BIRNEY/bioperl-1.2.2.tar.gz
Distribution    BIRNEY/bioperl-1.2.3.tar.gz
Distribution    BIRNEY/bioperl-1.2.tar.gz
Distribution    BIRNEY/bioperl-1.4.tar.gz
Distribution    BIRNEY/bioperl-db-0.1.tar.gz
Distribution    BIRNEY/bioperl-ext-1.4.tar.gz
Distribution    BIRNEY/bioperl-gui-0.7.tar.gz
Distribution    BIRNEY/bioperl-run-1.2.2.tar.gz
Distribution    BIRNEY/bioperl-run-1.4.tar.gz
Distribution    BOZO/Fry-Lib-BioPerl-0.15.tar.gz
Distribution    CRAFFI/Bundle-BioPerl-2.1.8.tar.gz
12 items found

Bernd Mueller
phone: +49 179 2336692
email: bernd at kirx.de

More information about the Bioperl-l mailing list