[Bioperl-l] Homologene parser?
cjfields at uiuc.edu
Mon Aug 13 23:21:54 EDT 2007
It looks like Heikki responded and thought a good place for it would
be Bio::SeqIO, but it didn't go anywhere I suppose. I see that a few
other posts suggest it could be placed in Bio::Cluster as well which
I'm not familiar with. We could add it in if you were still
interested, just need to find a good place for it; might be nice to
have a Parse::RecDescent-based parser.
On Aug 13, 2007, at 7:52 PM, Andrew Macgregor wrote:
> On 13/08/2007, at 6:29 PM, neeti somaiya wrote:
>> Does anyone know of any Homologene parser, if available?
>> Please let me know.
>> Thanks and Regards,
> Hi Neeti,
> Quite a long time ago now I wrote an Homologene parser and posted it
> to the mailing list:
> I don't know if this still works but you could use it as a starting
> point. There may also be something newer out there too, I don't know.
> If you search the mailing list archives you'll get a few messages
> around the topic.
> Cheers, Andrew.
> Andrew Macgregor
> Centre for Comparative Genomics, Murdoch University
> Email: amacgregor at ccg.murdoch.edu.au
> Tel: (08) 9360 2961
> Bioperl-l mailing list
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