[Bioperl-l] Fwd: Regarding Bioperl program
jason at bioperl.org
Thu Feb 1 19:55:26 EST 2007
re-forwarding Sandhya's email to the list so the email address is
The approach that is coded in bioperl is for distance based data such
as evolutionary distance of DNA or protein sequences - I assume you
are talking about clustering expression data? You may want to focus
on the available literature and toolkits that focus on expression
data - something BioPerl doesn't deliberately focus on right now.
Begin forwarded message:
> From: "sandhya khatal" <sandhya.khatal at gmail.com>
> Date: February 1, 2007 5:06:42 AM PST
> To: jason at bioperl.org
> Subject: Regarding Bioperl program
> Respected Sir,
> I want to do a program which gives dendrogram
> UPGMA a clustering method, but i want this dendrogram by using single
> linkage or centroid method.Can u help me for this.U have given the
> code for
> tree but i want dendrogram as output by using above any method.
> Thanks for anticipating.
> Sandhya Khatal.
Miller Research Fellow
University of California, Berkeley
More information about the Bioperl-l