[Bioperl-l] DB.t failures

Sendu Bala bix at sendu.me.uk
Thu Feb 15 08:37:32 EST 2007


Jay Hannah wrote:
> On Feb 14, 2007, at 8:02 AM, Sendu Bala wrote:
>> DB.t is failing with BIOPERLDEBUG set. Apparently, we are no longer
>> getting sequences back from NCBI in the order we requested them in  
>> batch
>> mode.
> 
> Is this the same result you get?
> 
> 
> DIED. FAILED tests 59-60, 63-64, 67-68, 71-72
>          Failed 8/113 tests, 92.92% okay (less 8 skipped tests: 97  
> okay, 85.84%)
> Failed Test Stat Wstat Total Fail  Failed  List of Failed
> ------------------------------------------------------------------------ 
> -------
> DB.t           8  2048   113    8   7.08%  59-60 63-64 67-68 71-72
> 8 subtests skipped.

Yes, those fails are all caused by results in the wrong order (I believe).


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