bix at sendu.me.uk
Tue Jan 2 11:16:57 EST 2007
Karen Buysse wrote:
> Dear all,
> I want to use the BioPerl repeatmasker program.
> However, when I run the following program (=first lines of the synopsis):
> use Bio::Tools::Run::RepeatMasker;
> my @params=("mam" => 1,"noint"=>1);
> my $factory = Bio::Tools::Run::RepeatMasker->new(@params);
> I get the error message: *RepeatMasker program not found as or not
> I have the file *RepeatMasker.pm* in the following directories:
> Can anyone please help me with this?
Bioperl run modules are not programs but front-ends ('wrappers') to
external programs. You need to install the program that corresponds to
the module before it will work.
Visit http://www.repeatmasker.org/ to get the program and database.
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