[Bioperl-l] bioperl-network-1.5.2_100 node IDs

Mikel Egaña Aranguren mikel.eganaaranguren at cs.man.ac.uk
Sun Jan 21 11:52:53 EST 2007


Hello;

is there a way of fine-tuning the types of ids that are stored in the 
Node objects, in the Bio::Network module?

For example, if I have the following in an Intact psi xml file:

             <primaryRef db="uniprotkb" id="Q9Y738" 
secondary="mis12_schpo" version="SP_37"/>
             <secondaryRef db="interpro" id="IPR008685" secondary="Mis12"/>
             <secondaryRef db="intact" id="EBI-1002822" 
secondary="mis12_schpo"/>

How can I retrieve the id "mis12_schpo"? At the moment it just gives me 
"Q9Y738".

Thanks a lot.

Regards

-- 

Mikel Egaña Aranguren - http://www.mikeleganaaranguren.com

PhD student - Manchester University Computer Science

Cell Cycle Ontology
	http://www.cellcycleontology.org

Gene Ontology Next Generation 
	http://www.gong.manchester.ac.uk

Metabolik BioHacklab
	http://www.sindominio.net/metabolik/weblog

X-Evian
	http://x-evian.org/


	



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