[Bioperl-l] Species name problems with bioperl-db

Sendu Bala bix at sendu.me.uk
Fri Jan 26 13:27:03 EST 2007


Roy Chaudhuri wrote:
> Hi.
[snip]
> It is easy to see why problems are arising- the species name used in the 
> GenBank/Uniprot entry is sometimes a synonym of that in the supplied 
> lineage, rather than an exact duplicate. Is the check on line 167 really 
> necessary? Or at least could the throw be changed to a warn?

I acknowledge this report (thank you for the details) and will 
investigate when I have the time. I must have had some good reason for 
the check throwing, but will confirm if has to be done that way.

If you could, please make a new bug report on bugzilla for this.


Cheers,
Sendu.


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