[Bioperl-l] DB::SeqFeature::Store::GFF3Loader question

Chris Fields cjfields at uiuc.edu
Thu Jul 12 12:09:02 EDT 2007


I have been running into some GFF formatting issues where the  
attributes column is left undef (no '.'), which causes  
GFF3Loader::parse_attributes() to complain with an 'use of undefined  
string with split' warning.  Would it be okay with the powers that be  
(Scott, Lincoln) to add a warning or exception there?  I'm guessing a  
warning is better in this case, as just returning works fine.

chris


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