[Bioperl-l] protparam

Chris Fields cjfields at uiuc.edu
Fri Jun 8 08:37:27 EDT 2007


Richard,

We'll gladly add this in, though it'll need to be bioperlized  
(inherit Bio::Root::Root).  We also generally ask for tests but it  
should be easy to write up a quick test suite using any protein seq.

If you can could you add some bioperl-like POD to the module (i.e.  
SYNOPSIS, AUTHOR, DESCRIPTION, etc)?

thanks!

chris

On Jun 8, 2007, at 6:00 AM, richard wrote:

>
> Hi,
>
> I noticed that in April someone asked whether there was a bioperl mod
> for obtaining protein sequence related properties using protparam.
> I have a module that could potentially be submitted to bioperl for  
> this
> purpose. Does anybody have any thoughts on whether it should go in?
>
> Example script and the module are at:
>
> http://81.5.159.173/webshare/
>
>
> Cheers
> Rich
>
>
>
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Christopher Fields
Postdoctoral Researcher
Lab of Dr. Robert Switzer
Dept of Biochemistry
University of Illinois Urbana-Champaign





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