[Bioperl-l] protparam

Shameer Khadar shameer at ncbs.res.in
Fri Jun 8 10:11:00 EDT 2007


Richard,

I asked for protparam module in bioperl !
Thats a good job.

Cheers,
SK

> Richard,
>
> We'll gladly add this in, though it'll need to be bioperlized
> (inherit Bio::Root::Root).  We also generally ask for tests but it
> should be easy to write up a quick test suite using any protein seq.
>
> If you can could you add some bioperl-like POD to the module (i.e.
> SYNOPSIS, AUTHOR, DESCRIPTION, etc)?
>
> thanks!
>
> chris
>
> On Jun 8, 2007, at 6:00 AM, richard wrote:
>
>>
>> Hi,
>>
>> I noticed that in April someone asked whether there was a bioperl mod
>> for obtaining protein sequence related properties using protparam.
>> I have a module that could potentially be submitted to bioperl for
>> this
>> purpose. Does anybody have any thoughts on whether it should go in?
>>
>> Example script and the module are at:
>>
>> http://81.5.159.173/webshare/
>>
>>
>> Cheers
>> Rich
>>
>>
>>
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>
> Christopher Fields
> Postdoctoral Researcher
> Lab of Dr. Robert Switzer
> Dept of Biochemistry
> University of Illinois Urbana-Champaign
>
>
>
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> http://lists.open-bio.org/mailman/listinfo/bioperl-l
>


-- 
Shameer Khadar
Prof. R. Sowdhamini's Lab (# 25) The Computational Biology Group
National Centre for Biological Sciences (TIFR)
GKVK Campus, Bellary Road, Bangalore - 65, Karnataka - India
T - 91-080-23666001 EXT - 6251
W - http://www.ncbs.res.in



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