[Bioperl-l] Can't locate loadable object for module TFBS::Ext::pwmsearch

=?gb2312?q?=D1=EE=20=C5=F4=B3=CC?= pengchy at yahoo.com.cn
Tue Jun 12 03:00:46 EDT 2007


hi all,
   
  Today, I download the TFBS package from http://forkhead.cgb.ki.se/TFBS/, and uncompress it and copy all the files contained in the TFBS and Ext directories to directory "C:\perl\site\lib", then put Ext under the TFBS directory. I run the example script1.pl, but a wrong message respond: 
   
  Can't locate loadable object for module TFBS::Ext::pwmsearch in @INC (@INC contains: C:/perl/site/lib C:/perl/lib .) at C:/perl/site/lib/TFBS/Matrix/PWM.pm line 141
Compilation failed in require at C:/perl/site/lib/TFBS/Matrix/PWM.pm line 141, <DATA> line 206.
BEGIN failed--compilation aborted at C:/perl/site/lib/TFBS/Matrix/PWM.pm line 141, <DATA> line 206.
Compilation failed in require at C:/perl/site/lib/TFBS/Matrix/PFM.pm line 137, <
DATA> line 206.
BEGIN failed--compilation aborted at C:/perl/site/lib/TFBS/Matrix/PFM.pm line 137, <DATA> line 206.
Compilation failed in require at C:/perl/site/lib/TFBS/DB/TRANSFAC.pm line 52, <DATA> line 206.
BEGIN failed--compilation aborted at C:/perl/site/lib/TFBS/DB/TRANSFAC.pm line 52, <DATA> line 206.
Compilation failed in require at script1.pl line 3, <DATA> line 206.
BEGIN failed--compilation aborted at script1.pl line 3, <DATA> line 206.
shell returned 2
   
  when I run the list_matrices.pl script, the same message respond. But when I empty the pwmsearch.pm file, following message respond:
   
  TFBS/Ext/pwmsearch.pm did not return a true value at :/perl/site/lib/TFBS/Matr
x/PWM.pm line 141, <DATA> line 206.
BEGIN failed--compilation aborted at C:/perl/site/lib/TFBS/Matrix/PWM.pm line 11, <DATA> line 206.
Compilation failed in require at C:/perl/site/lib/TFBS/Matrix/PFM.pm line 137,
DATA> line 206.
BEGIN failed--compilation aborted at C:/perl/site/lib/TFBS/Matrix/PFM.pm line 17, <DATA> line 206.
Compilation failed in require at C:/perl/site/lib/TFBS/DB/TRANSFAC.pm line 52,
DATA> line 206.
BEGIN failed--compilation aborted at C:/perl/site/lib/TFBS/DB/TRANSFAC.pm line2, <DATA> line 206.
Compilation failed in require at script1.pl line 3, <DATA> line 206.
BEGIN failed--compilation aborted at script1.pl line 3, <DATA> line 206.
   
  Is anyone else meet the same problem? Is it a bug for TFBS package?


Best wishes!

Sincerely, Pengcheng
       
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