[Bioperl-l] Test overhaul complete

Chris Fields cjfields at uiuc.edu
Wed Jun 27 15:01:01 EDT 2007


On Jun 27, 2007, at 1:44 PM, Nathan S. Haigh wrote:

> Sendu Bala wrote:
>> ...
>> Bio::SeqIO::entrezgene is still generating 'Pseudo-hashes are
>> deprecated' warnings.
>
> Ah, that reminds me!
>
> I recently tried to do an install of the cvs head (a week or two  
> ago) on
> a clean installation of Debian 4.0 (etch). During the installation, of
> dependencies, Bio::ASN1::EntrezGene threw an error as it depends on
> Bioperl. I seem to remember this circular dependency cropping up  
> before
> - am I correct - and can you remind me how this was "fixed"?
>
> Cheers
> Nath

Wonder if Mingyi Liu would allow Bio::ASN1::EntrezGene to become part  
of Bioperl (and he could be come a dev).  That would solve it.

chris


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