[Bioperl-l] First cut svn repository

George Hartzell hartzell at alerce.com
Thu Jun 28 09:16:18 EDT 2007


Sendu Bala writes:
 > George Hartzell wrote:
 > > Chris Fields writes:
 > >  > [...]
 > >  > It looks like George Hartzell may be taking a crack at it, with  
 > >  > Rutger Vos, Nathan Haigh, and moi helping out where needed.  If so we  
 > >  > could have something testable relatively soon.  After that we'll need  
 > >  > to work out a few other issues, basically what's on Hilmar's list.
 > > 
 > > There's a repository on file:///home/hartzell/bioperl with all of the
 > > components projects in place.
 > > 
 > > If you have a dev.open-bio.org account and you're in the bioperl
 > > group, you're good to get at it via:
 > > 
 > >   file:///home/hartzell/bioperl
 > 
 > I'm confused. Presumably that only works whilst logged into 
 > dev.open-bio.org?

Yes, that only works if you're actually on the machine.

 > >   svn+ssh://dev.open-bio.org/home/hartzell/bioperl
 > 
 > I just tried:
 > 
 > svn co svn+ssh://dev.open-bio.org/home/hartzell/bioperl
 > 
 > on Mac OS X and things seemed to go well, except for this error message 
 > at the end:
 > 
 > 
 > svn: In directory 'bioperl/bioperl-live/tags/release-0-9-2/t/data'
 > svn: Can't move source to dest
 > svn: Can't move 
 > 'bioperl/bioperl-live/tags/release-0-9-2/t/data/.svn/tmp/prop-base/HUMBETGLOA.FASTA.svn-base' 
 > to 
 > 'bioperl/bioperl-live/tags/release-0-9-2/t/data/.svn/prop-base/HUMBETGLOA.FASTA.svn-base': 
 > No such file or directory
 > 
 > I also ended up with only:
 > bioperl-corba-server    bioperl-db              bioperl-live 
 > bioperl-network         bioperl-papers          biosql-schema
 > 
 > 
 > Am I doing something totally wrong here?

It looks like you tried to check out the *entire* repository.  It
never occured to me to try that.  I'll take a look at what you
reported.

g.


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