[Bioperl-l] First cut svn repository

Chris Fields cjfields at uiuc.edu
Thu Jun 28 11:20:46 EDT 2007

I can replicate the same problem (Mac OS X) with a full checkout:

svn: In directory 'bioperl/bioperl-live/tags/release-0-9-2/t/data'
svn: Can't move source to dest
svn: Can't move 'bioperl/bioperl-live/tags/release-0-9-2/t/data/.svn/ 
tmp/prop-base/HUMBETGLOA.FASTA.svn-base' to 'bioperl/bioperl-live/ 
No such file or directory

What local (mac) svn version are you using?  I'm running off macports:

svn --version
svn, version 1.4.4 (r25188)
    compiled Jun 16 2007, 23:40:53


On Jun 28, 2007, at 9:19 AM, Sendu Bala wrote:

> I tried again in the same location and it told me I had to 'svn
> cleanup', which I did. But subsequently it kept complaining about  
> files
> already being there.
> [snip]
>> Can another mac os x user out there give the Great Big Checkout a try
>> and see if it runs to completion.  Potential problems that come to
>> mind are:
>>   - the "mac's are case insensitive, sort of" problem
>>   - you filled up your disk
>>   - something else.
> Well, I didn't run out of disc space. After a rm -fr * and trying  
> again
> it failed at exactly the same point, in the same way.
> svn co
> svn+ssh://dev.open-bio.org/home/hartzell/bioperl/bioperl-live/tags/ 
> release-0-9-2/t/data
> causes this repeatable problem:
> [...]
> A    data/phredfile.phd
> svn: In directory 'data'
> svn: Can't move source to dest
> svn: Can't move 'data/.svn/tmp/prop-base/HUMBETGLOA.FASTA.svn-base' to
> 'data/.svn/prop-base/HUMBETGLOA.FASTA.svn-base': No such file or  
> directory
> That is with Mac OS X svn command-line client, version 1.4.4
> I can get bioperl-live/tags/release-0-9-2/t/data to check out fine  
> with
> a linux svn command-line client, version 1.2.3.
> Cheers,
> Sendu.
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/bioperl-l

Christopher Fields
Postdoctoral Researcher
Lab of Dr. Robert Switzer
Dept of Biochemistry
University of Illinois Urbana-Champaign

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