[Bioperl-l] First cut svn repository
hartzell at alerce.com
Thu Jun 28 15:43:38 EDT 2007
Chris Fields writes:
> On Jun 28, 2007, at 1:06 PM, George Hartzell wrote:
> > ...
> > I'm not 100% sure what's going on here, but I'm inclined to say "get a
> > real computer" (and yes, I'm typing this on a mac...). I have a mac
> > pro that runs FreeBSD-STABLE part time and it's ggrrreeaatt (as tony
> > the tiger used to say)....
> Ouch! Though it could be worse (**coughwindowscough**).
> > I think that we're having trouble with case sensitivity. My only
> > evidence is that I can see where there have been both HUMBETGLOA.FASTA
> > and HUMBETGLOA.fasta in the tree at various times. I can't figure out
> > anything else that's weird about that file. On the other hand, I
> > can't see how this would cause the error you're seeing though.
> Odd that other branches (including the main trunk) work but that one
> > The experiment would be to grab a usb or firewire disk (or even a
> > memory stick), partition/format it as case sensitive (or even *unix*)
> > and try to do
> > svn co svn+ssh://dev.open-bio.org/home/hartzell/bioperl/bioperl-
> > live/tags/release-0-9-2/t/data
> > into it. If it works, voila. If not, I'll keep making stuff up, err,
> > thinking about it.
> > g.
> I'll have to figure out why I can't get ssh keys to work locally to
> test it out more (I have a usb drive to test with); just don't have
> time at the moment.
I just did the experiment, and filename-insensitivity seems to be
I'm using an svn I picked up from http://www.codingmonkeys.de/mbo/.
I reformatted a memory stick to be case sensitive and co of
worked, then I made a directory in my home dir (normal mac thing) and
got the same error as above.
I can get a copy of the trunk, so I'm inclined to ask someone to
mention the problem on the wiki and then just ignore it.
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