[Bioperl-l] retrieven ids

Samuel GRANJEAUD - IR/IFR137 granjeau at tagc.univ-mrs.fr
Thu Mar 1 02:36:43 EST 2007


Hi,

I am not sure it's the key answer but the FAQ may help you

http://www.bioperl.org/wiki/FAQ#How_do_I_retrieve_a_nucleotide_coding_sequence_when_I_have_a_protein_gi_number.3F

Cheers,
--Samuel

Luba Pardo wrote:
> Hi everyone,
> I wonder if someone could give an advice of the following:
> I want to retrieve the DNA coding sequence of a RefSeq protein id. I do not
> want to translate the protein back to DNA, but rather get the DNA coding
> sequence ID and then retrieve the DNA sequence from Gen Bank. Is there any
> module that allow to get all possible ids for a sequence given a gi protein
> ?
>
> Thank you very much in advance,
> L. Pardo
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