[Bioperl-l] New Article on Approaches to Web Development for Bioinformatics

Jason Stajich jason at bioperl.org
Sat Mar 3 21:56:32 EST 2007


We'll do a new stable series (1.6) sometime this year.  There have  
been several API changes that need to be vetted or removed before we  
can really make 1.6.  Chris, Sendu, Torsten, and many others have  
been doing a great job bringing things up to speed for a very solid  
new stable release series.

zipfiles are up now. thanks.

On Mar 3, 2007, at 10:15 AM, Alex Amies wrote:

> Sendu,
> Thanks for your comment.  Looking into it a bit more I am confused.
> I see from the BioPerl download page that  Bioperl 1.4.0, which is the
> version I used, is listed at the latest Stable Release, even though it
> was released in Dec-2003.   Bioperl 1.5.2 is listed as a Developer
> Release.  Is that right?  Also, the links to the links to the 1.4.0
> zip files are dead.
> Alex
> On 3/2/07, Sendu Bala <bix at sendu.me.uk> wrote:
>> Alex Amies wrote:
>>> I have written an article on Approaches to Web Development for
>>> Bioinformatics at
>>> http://medicalcomputing.net/tools_dna1.php
>>> There is a fairly large section on BioPerl at
>>> http://medicalcomputing.net/tools_dna13.php
>>> I hope that someone gets something useful out of it.  I also  
>>> looking for
>>> feedback on it and, in particular, please let me know about any  
>>> mistakes in
>>> it.
>> Thanks for that. Can I suggest you remove the instruction to install
>> BioPerl 1.4 and replace it with one to install the latest version?  
>> Ie.
>> summarise information at:
>> http://www.bioperl.org/wiki/Installing_BioPerl
>> Or just point people to that page.
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Jason Stajich
Miller Research Fellow
University of California, Berkeley
lab: 510.642.8441

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