[Bioperl-l] problem for Bio::Tools::Run::RNAMotif

Sendu Bala bix at sendu.me.uk
Wed Mar 7 11:59:54 EST 2007


bertrand beckert wrote:
> hello,
> 
> I am using RNAmotif suite of programs...
> I just try the module Bio::Tools::Run::RNAMotif, the lastest version (
> RNAMotif.pm,v 1.4 2007/02/07--)
> 
> In order to  test how it function i just try the short example...  but as
> you can imagine it don't work....
> 
> error:
> laptop:~/rnamot_test$ ./test_rnamotif.pl
> Can't locate object method "_set_from_args" via package
> "Bio::Tools::Run::RNAMotif" at
> /usr/local/share/perl/5.8.8/Bio/Tools/Run/RNAMotif.pm line 176, <GEN0> line
> 1.
> laptop:~/rnamot_test$
> 
> could you help me?

You'll also need to update Bio::Root::RootI and 
Bio::Tools::Run::WrapperBase from CVS.


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