[Bioperl-l] nasty space in Bio::DB::SeqFeature::Store prevents Gbrowse from running with bioperl-live

Lincoln Stein lstein at cshl.edu
Mon Mar 19 11:49:38 EDT 2007


Thanks! It's fixed.

Lincoln

On 3/16/07, Daniel Lang <daniel.lang at biologie.uni-freiburg.de> wrote:
>
> Hi,
>
> there's a tiny error in the pod doc of the alias get_feature_by_name
> that prevents it to be found at all (e.g. when using gbrowse).
>
> The attached patch should fix it.
>
> Daniel:-)
> --
>
> Daniel Lang
> University of Freiburg, Plant Biotechnology
> Schaenzlestr. 1, D-79104 Freiburg
> fax: +49 761 203 6945
> phone: +49 761 203 6974
> homepage:  http://www.plant-biotech.net/
> e-mail: daniel.lang at biologie.uni-freiburg.de
>
> #################################################
> My software never has bugs.
> It just develops random features.
> #################################################
>
>
>
>
> --- bioperl-live/Bio/DB/SeqFeature/Store.pm     2007-03-16 19:22:
> 21.000000000 +0100
> +++ Store.pm    2007-03-16 19:23:53.000000000 +0100
> @@ -705,7 +705,7 @@
>
> This method is provided for backward compatibility with gbrowse.
>
> -= cut
> +=cut
>
> sub get_feature_by_name { shift->get_features_by_name(@_) }
>
>
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>



-- 
Lincoln D. Stein
Cold Spring Harbor Laboratory
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