[Bioperl-l] about mirbase

Chris Fields cjfields at uiuc.edu
Tue Mar 20 23:38:46 EDT 2007

Unfortunately there is no direct interface that I know of.  I did  
notice you can download the miRNA sequences in EMBL format or FASTA  
format from here:


so you might be able to index them somehow locally.


On Mar 19, 2007, at 11:17 AM, zhang zhang wrote:

> Dear all,
> Is there any modules in Bioperl which can link to MirBase(micrRNA  
> database)?? If there is, could you give me the script about how to  
> access it? Thanks in advance.
> Regards,
> Jenny
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Christopher Fields
Postdoctoral Researcher
Lab of Dr. Robert Switzer
Dept of Biochemistry
University of Illinois Urbana-Champaign

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