cjfields at uiuc.edu
Wed Mar 21 00:24:10 EDT 2007
On Mar 20, 2007, at 10:59 PM, Neil Saunders wrote:
> hi guys,
> Thanks for your input on Bio::Tools::Signalp. I got a colleague of
> mine, Ronald Schroeter (ronalds at itee.uq.edu.au) to look at the
> module and he has made some minor modifications so that it now
> parses signalp version 3.0 output correctly.
> I've added his module as an attachment at bugzilla:
> This is not meant to replace Emmanuel's efforts with
> ExtendedSignalp.pm - rather, it functions as a replacement for the
> existing Signalp.pm (which doesn't handle version 3 output). I
> hope this doesn't muddy the waters too much.
Thanks for the module Neil; the additional v3 Signalp tests now
pass. I committed both to CVS.
We probably should merge the two Signalp modules ala the recent
Glimmer work (parses all Glimmer versions now). Unfortunately I
don't know anyone who has time for it at this moment (I'm up to my
neck in my own work!).
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