[Bioperl-l] chromatogram

Torsten Seemann torsten.seemann at infotech.monash.edu.au
Thu Nov 15 20:13:22 EST 2007


> Just to add to this, does anyone have any code for reading .sff 'traces'
> from 454 sequences?

The .SFF files can be manipulated using the SFF tools which 454
distribute with their result data. eg. "sffinfo 454AllContigs.sff"
will list all the reads with the original flowgram values etc.
However, the SFF tools are i386.Linux binaries, so not really a
portable solution.

-- 
--Torsten Seemann
--Victorian Bioinformatics Consortium, Monash University


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