[Bioperl-l] **Fwd: Re: divide and blast blastunsplit blast subsequence

Kevin Lam ULNJUJERYDIX at spammotel.com
Thu Oct 11 07:32:33 EDT 2007

wow thanks for the replies!
I have gotten the answer from the blast help

Subsequence range can be specified by the –L parameter. Please refer
to this web document for more information:


Other end-user oriented standalone blast documents are at:


but will try this method as well to see which works better.


There is a script that comes with the bioperl core distribution,

> bp_split_seq.pl, which does this.  Here's the CVS location:
> http://cvs.bioperl.org/cgi-bin/viewcvs/viewcvs.cgi/bioperl-live/
> scripts/seq/?cvsroot=bioperl
> chris

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