[Bioperl-l] Bio::SeqFeature::Annotated API change

Sendu Bala bix at sendu.me.uk
Sat Oct 27 03:03:12 EDT 2007

Chris Fields wrote:
> On Oct 26, 2007, at 6:47 PM, Sendu Bala wrote:
>> I've left source() as a SimpleValue, at least until issues with
>> DB::Store are resolved wrt ontologies (it stores the entire
>> ontology for each feature in the database, increasing storage 
>> requirments > 800x).
> Do you mean SeqFeature::Store or OntologyStore (I'm guessing the 
> latter)?

Sorry, I meant Bio::DB::SeqFeature::Store. This problem exists if you 
set the type() as well of course; the only reason I don't suffer from 
that is that I deliberately avoid setting the type on my features.

More information about the Bioperl-l mailing list