[Bioperl-l] display protein/CDS multiple sequence alignments with exon boundaries
jay at jays.net
Tue Sep 11 17:15:17 EDT 2007
Lincoln Stein wrote:
> You can view a simple multiple alignment now. Go to www.wormbase.org
> <http://www.wormbase.org>, turn on some of the EST tracks and then
> zoom down to base pair level.
> In bio::graphics, use the "segments" glyph and turn on the
> -draw_target option. The features must have DNA attached to them.
Wow. *http://tinyurl.com/yuz8bq* I hadn't seen that done before.
> What's coming soon is support for MAF format, which provides
> genome-level alignments.
I'm looking forward to trying to wrap my head around that. :)
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