[Bioperl-l] [Gmod-gbrowse] quick update on bioperl nightly builds

Scott Cain cain.cshl at gmail.com
Wed Apr 2 08:28:22 EDT 2008


Hi Chris,

(trimmed out gbrowse mailing list since this is just bioperl business)

Speaking of the pass through stuff, Sendu mentioned that I stomped on
some changes to Build.PL that you and he did when I committed that
change, so it should be rolled back.  Is there a good (svn) way to do
that?  Or should I just copy the contents of the old (good) Build.PL
into a fresh file in my checkout and commit it?

Thanks,
Scott

On Tue, 2008-04-01 at 22:59 -0500, Chris Fields wrote:
> Nope, that isn't intended.  I fixed it and reran it manually, so it  
> should be fine now (note I didn't update the log file; the next cron  
> run will catch that).
> 
> I may toy around with your recent passthrough flag addition to try  
> getting automated PPM's up and running.
> 
> chris
> 
> On Apr 1, 2008, at 10:12 PM, Scott Cain wrote:
> 
> > Hi Chris,
> >
> > The tarball is currently (Apr 1) being built in a tmp directory, so  
> > that
> > the extracted tarball is ./tmp/bioperl-live/.  Is that intended?
> >
> > Thanks,
> > Scott
> >
> > On Tue, 2008-04-01 at 19:45 -0500, Chris Fields wrote:
> >> I'm simplifying the nightly build archive names (removing svn  
> >> revision
> >> # and date) in case anyone needs to update bioperl-live/run/db/ 
> >> network
> >> on a regular basis (read: GBrowse installations).  When I have time
> >> I'll start working on automated builds, which will require some extra
> >> work with Module::Build and Build.PL.
> >>
> >> chris
> >> _______________________________________________
> >> Bioperl-l mailing list
> >> Bioperl-l at lists.open-bio.org
> >> http://lists.open-bio.org/mailman/listinfo/bioperl-l
> > -- 
> > ------------------------------------------------------------------------
> > Scott Cain, Ph. D.                                         cain at cshl.edu
> > GMOD Coordinator (http://www.gmod.org/)                      
> > 216-392-3087
> > Cold Spring Harbor Laboratory
> >
> > _______________________________________________
> > Bioperl-l mailing list
> > Bioperl-l at lists.open-bio.org
> > http://lists.open-bio.org/mailman/listinfo/bioperl-l
> 
> 
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-- 
------------------------------------------------------------------------
Scott Cain, Ph. D.                                   cain.cshl at gmail.com
GMOD Coordinator (http://www.gmod.org/)                     216-392-3087
Cold Spring Harbor Laboratory




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