[Bioperl-l] Tandem Repeats Finder?
Ortutay Csaba Péter
csaba.ortutay at gmail.com
Mon Apr 14 00:15:22 EDT 2008
Hello, I have used TRF in my earlier projects. It is nice and quick tool.
There was not ready made parsers those times (5-6 years ago) so we have
written our own.
> Has anyone tried TRF?
> I notice UCSC is using it for all their simple repeat annotations and
> thought it might be better than what we're currently using (Sputnik)
> And is there a BioPerl parser for it's output or am I going to have to
> write my own ?
Csaba Ortutay PhD
University of Tampere
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