[Bioperl-l] [bioperl-l] index::abstract on win and unix
Russell.Smithies at agresearch.co.nz
Wed Apr 16 16:49:49 EDT 2008
Did you check the format of your input file?
i.e. DOS or UNIX line endings?
> -----Original Message-----
> From: bioperl-l-bounces at lists.open-bio.org [mailto:bioperl-l-bounces at lists.open-
> bio.org] On Behalf Of Frédéric Romagné
> Sent: Thursday, 17 April 2008 5:25 a.m.
> To: bioperl-l at lists.open-bio.org
> Subject: [Bioperl-l] [bioperl-l] index::abstract on win and unix
> i made a program which use Bio::Index::GenBank and i tested it under
> unix, that worked well.
> But i have to launch it under windows and it seems not to work on.
> Here is the problem :
> my $dbobj = Bio::Index::Abstract->new("Data/$db");
> my $seq = $dbobj->get_Seq_by_acc($id);
> print $seq->display_id."\n";
> did not print the same number than $id !!! So i don't work on the
> sequence expected...
> I use the SVN sources on unix and the Perl package manager for
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
Attention: The information contained in this message and/or attachments
from AgResearch Limited is intended only for the persons or entities
to which it is addressed and may contain confidential and/or privileged
material. Any review, retransmission, dissemination or other use of, or
taking of any action in reliance upon, this information by persons or
entities other than the intended recipients is prohibited by AgResearch
Limited. If you have received this message in error, please notify the
More information about the Bioperl-l