[Bioperl-l] Priorities for a bioperl-1.6 release

Lincoln Stein lincoln.stein at gmail.com
Fri Feb 15 15:17:31 EST 2008


> * perl 5.10 compliance (appears to mostly work now)
> * GFF/GFF3 compliance


I've been doing a lot of work on this recently. I think it's much improved.
No problems with 5.10 for the modules that I use frequently.

Lincoln


>
> * BioSQL 1.0 compliance (impending)
> * POD and test coverage
> * smoke tests for bioperl-live/db/etc.
> * smaller, more focused core (less dependencies)
> * separating out experimental or poorly maintained modules into a
> separate 'bioperl-dev' distribution
> * bioperl-db issues with Bio::Species changes
> * module maintenance
> * sequence format roundtripping (i.e. genbank, embl, swissetc)
> * additional sequence parsers (insdcxml, etc)
> * enhancement requests in bugzilla (Albert?)
>
> chris
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>



-- 
Lincoln D. Stein
Cold Spring Harbor Laboratory
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