[Bioperl-l] Clustering of Gene Ontology Terms

K. Shameer shameer at ncbs.res.in
Wed Feb 20 04:35:43 EST 2008


Dear All,

Is there any module available in Bioperl that can be used to perform
clustering of Gene Ontology terms from a set of Gene IDs and its
respective Flybase GO annotations. These Gene IDs where hits from a
high-throughput experiment. We would like to find the GO-Term enriched
areas to get better biological insight irrespective of the experimental
parameters.

I am extremely sorry if this is off-topic :
Can you please point me towards any paper/libraries that had used Gene
Ontology based clustering ?

Many thanks in advance,
-- 
K. Shameer
Prof. R. Sowdhamini's Lab (# 25) The Computational Biology Group
National Centre for Biological Sciences (TIFR)
GKVK Campus, Bangalore - 65, Karnataka - India
T - 91-080-23666001 EXT - 6251
W - http://www.ncbs.res.in



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