[Bioperl-l] redundant sequences

Sonal Singhal singhal at berkeley.edu
Tue Jan 15 17:50:12 EST 2008


Hi all,

I am mining a few genomes to find all the genes in a gene family, and
of course multiple BLAST searches of different paralogs are returning
a lot of redundant hits.   I have searched the BioPerl documentation,
and I cannot find an easy way to cluster and then purge redundant
sequences.  Any ideas?

Cheers,
sonal


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