[Bioperl-l] bioseqDB error

Hilmar Lapp hlapp at gmx.net
Tue Jan 29 16:40:21 EST 2008


This would mean that two or more seqfeatures with the same type for  
the same sequence exist in the input data, each with rank 1.

Normally the rank will be incremented for each seqfeature of a  
sequence, so I'm not sure how this is happening here w/o seeing the  
data.

	-hilmar
On Jan 29, 2008, at 12:15 PM, snoze pa wrote:

> Dear Users,
> I tried the to refresh installation and seems it is working. But  
> when I
> loading sequences then it is giving me following warning messages.  
> Am i
> doing alright? or i am missing huge chunk of sequences..Thanks in  
> advance
> s
>
> -------------------- WARNING ---------------------
> MSG: insert in Bio::DB::BioSQL::SeqFeatureAdaptor (driver) failed,  
> values
> were ("","1") FKs (27,3,4)
> Duplicate entry '27-3-4-1' for key 2
> ---------------------------------------------------
> ...
> ...
> and so on
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-- 
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: Hilmar Lapp  -:-  Durham, NC  -:-  hlapp at gmx dot net :
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