[Bioperl-l] found the error tarp in load_seqdatabase.pl

snoze pa snoze.pa at gmail.com
Wed Jan 30 14:30:22 EST 2008


Hi Hilmar,

 After spending lots of time i figure out the error. I am able to load
sequences if the sequences do not have following entry

xrefs (non-sequence databases):

If the Genbank sequence have this entry then script load_seqdatabase.pl is
crashing. I try it in couple of sequences and found it is the culprit line
genbank format.  But this line is important as it contain lots of
information... so I am wondering how to solve this problem

Any help?

Thanks in advance
s


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