[Bioperl-l] install Perl

Roy Chaudhuri roy.chaudhuri at gmail.com
Fri Jul 4 10:26:04 EDT 2008


Also, if you don't have root access and can't persuade your sysadmin to 
install it for you, see:
http://bio.perl.org/wiki/Installing_Bioperl_for_Unix#INSTALLING_BIOPERL_IN_A_PERSONAL_MODULE_AREA

Roy.
--
Dr. Roy Chaudhuri
Department of Veterinary Medicine
University of Cambridge, U.K.

Simon Andrews wrote:
> On 4 Jul 2008, at 15:00, Tran Trang wrote:
> 
>> Dear:
>>
>> I followed the instruction "INSTALLING BIOPERL THE EASY WAY USING
>> 'Build.PL'" at the website
>> http://bio.perl.org/wiki/Installing_Bioperl_for_Unix for installing  
>> the
>> BIOPERL package. When I do the command
>>
>>> perl Build.PL
>> I obtained the following lines. I seems that is not good and I did  
>> not win
>> to install this package? I have the same problem when installing
>> BIOPERL-RUN package.
>>
>>
>> Files=26, Tests=750, 14 wallclock secs ( 5.77 cusr +  8.16 csys =  
>> 13.93 CPU)
>>   /usr/bin/make test -- OK
>> Running make install
>> /usr/bin/perl Build --makefile_env_macros 1 install
>> mkdir /usr/local/man/man1: Permission non accord�e at
>> /usr/share/perl/5.8/ExtUtils/Install.pm line 112
> 
> It looks like you're running this as a user who doesn't have enough  
> permissions to install the perl modules into the necessary system  
> directories.  All the tests are OK, you just can't copy the files at  
> the end.
> 
> Try running it as root (either directly or via sudo) and it should  
> work OK.
> 
> TTFN
> 
> Simon.
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/bioperl-l



More information about the Bioperl-l mailing list