[Bioperl-l] Methods to GenBank
ocar1987 at hotmail.com
Mon Jul 28 16:36:09 EDT 2008
I'm building a script to get information from GenBank according to some Accession Id, I've looked for a method to retrieve the organism lines from the GenBank, but i haven't found any specific for this. Does anyone know what is the method for this?
For example i got this GenBank File:
LOCUS SLLCP 1058 bp ss-RNA linear VRL 16-AUG-1994
DEFINITION Satellite tobacco mosaic virus coat protein RNA, complete cds.
VERSION M25782.1 GI:530201
KEYWORDS coat protein.
SOURCE Tobacco necrosis satellite virus
ORGANISM Tobacco necrosis satellite virus
Viruses; Satellites; Satellite Viruses.
REFERENCE 1 (bases 1 to 1058)
AUTHORS Mirkov,T.E., Mathews,D.M., Du Plessis,D.H. and Dodds,J.A.
TITLE Nucleotide sequence and translation of satellite tobacco mosaic
And I want to get the Organism part in my script.
O'car Campos C.
Estudiante Ingeniería en Bioinformática
Universidad de Talca.
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