[Bioperl-l] Limiting organism scope on bioperl BLAST searches

Nathan Haseley (RIT Student) nsh9351 at rit.edu
Mon Jun 16 10:17:41 EDT 2008


Hello!
   I am trying to write a perl script comparing proteins from a group of mammals.  I am only interested in 5 organisms.  Is there a way to limit my bioperl BLAST search to specific genome databases?  Do you have any other suggestions for the most effective way to achieve this filtering?  Thanks!
Nathan




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