[Bioperl-l] problems with clustalw

Sendu Bala bix at sendu.me.uk
Sat May 10 02:02:56 EDT 2008


nisa_dar wrote:
> I need to do multiple sequence alignments of DNA sequences by using Bioperl.
> I am using the following module
> Bio::Tools::Run::Alignment::Clustalw;
> and I am getting the following error message
> 
> Can't locate Bio/Tools/Run/Alignment/Clustalw.pm in @INC 

You need to install Bioperl-run, eg.
cpan
cpan>install S/SE/SENDU/bioperl-run-1.5.2_100.tar.gz
(if you have core 1.5.2)


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