[Bioperl-l] quick question about Yn00.pm
jason at bioperl.org
Thu May 22 00:09:28 EDT 2008
please email the list with questions as well.
The program is called yn00 so I don't know what you get that message.
Did you actually install PAML? what does 'which yn00' say?
Did you specify the path to the executable with
On May 21, 2008, at 4:25 PM, zhuangli liang wrote:
> Dear Jason,
> I am really sorry to bother you at this email address, but I am
> working on a project and really need to run the KaKs calculation
> urgently. I am using your Yn00.pm module as in
> Bio::Tools::Run::Phylo::PAML::Yn00, which I installed from bioperl-
> When I run the example script given in the Synopsis of Yn00.pm, I
> got the following error:
> ------------- EXCEPTION -------------
> MSG: unable to find executable for 'yn'
> STACK Bio::Tools::Run::Phylo::PAML::Yn00::run Yn00.pm:265
> STACK toplevel test.pl:13
> Could you please give me some suggestions to make it work? Thanks
> a lot!!!
> I am using perl, v5.8.8 built for i386-linux-thread-multi.
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