[Bioperl-l] Re peatMasker not found

Sendu Bala bix at sendu.me.uk
Thu May 22 18:01:53 EDT 2008


Smithies, Russell wrote:
> AFAIK, you need to pay for Repbase (we pay around US$6,200 per year)
> If you don't want to pay for Repbase, you'll need to create your own
> repeat library.

If you're academic you can register and download the RepeatMasker 
edition from here:
http://www.girinst.org/server/RepBase/index.php

vdar then needs to extract the files into the location that RepeatMasker 
is trying look for them and it will work.


More information about the Bioperl-l mailing list