[Bioperl-l] [rt.cpan.org #36117] Circular dependency

Sendu Bala via RT bug-bioperl at rt.cpan.org
Tue May 27 11:01:38 EDT 2008


       Queue: bioperl
 Ticket <URL: http://rt.cpan.org/Ticket/Display.html?id=36117 >

On Thu May 22 20:23:58 2008, STRO wrote:
> bioperl-1.5.2_102 depends on Bio::ASN1::EntrezGene
> Bio-ASN1-EntrezGene-1.091 depends on Bio::Index::AbstractSeq
> Bio::Index::AbstractSeq is a part of bioperl
> 
> So we have a circular dependency.

Yes. However, it isn't a strict dependency of BioPerl, but an optional
installation. So chose not to install it.



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