[Bioperl-l] Withdraw Bio::Graphics and Bio::DB::SeqFeature from bioperl distribution?

Sendu Bala bix at sendu.me.uk
Mon Nov 10 18:46:52 EST 2008


Lincoln Stein wrote:
>    - Bio::Perl -- the core distribution, containing Bio::Root, Bio::Seq,
>    BioSeqFeature, Bio::SeqIO and Bio::Annotation
>    - Bio::Align -- alignment support
>    - Bio::Ontology -- ontology support
>    - Bio::Microarray -- microarray support
>    - Bio::PopGen -- population genetics
>    - Bio::SeqEvolution -- evolutionary biology
>    - Bio::Structure -- structures
>    - Bio::Tree -- trees
> 
> I wonder how many interdependencies there are to disentangle?

See discussion here:
http://thread.gmane.org/gmane.comp.lang.perl.bio.general/16631/focus=16816
(Once again I use Bio:Graphics as an example during the discussion - 
popular modules! ;) )

I never made an attempt to disentangle it myself, but hey - pretty 
picture! :)


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