[Bioperl-l] quick pairwise alignment

Dave Messina David.Messina at sbc.su.se
Tue Nov 25 13:46:21 EST 2008

Hi Alper,
It looks like StandAloneBlast is having trouble locating bl2seq. Do you have
bl2seq installed on your machine at /usr/bin/bl2seq?

If it is installed, you might try running a test outside of bioperl, just to
verify that your input, output, and bl2seq are working correctly.


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