[Bioperl-l] xyplot howto?

Vesselin Baev vebaev at gmail.com
Sun Oct 12 16:44:39 EDT 2008


Dear All,
I have a file containing methylation profile in GFF format such:
Chr1	ATIDB	mCIP_col_BU_UB_methylation	1	24	1.5240512e-01	.	.	Name="methylation
Chr1:mCIP_col_BU_UB"
Chr1	ATIDB	mCIP_col_BU_UB_methylation	25	59	1.4491698e-01	.	.	Name="methylation
Chr1:mCIP_col_BU_UB"
Chr1	ATIDB	mCIP_col_BU_UB_methylation	60	112	8.0595555e-02	.	.	Name="methylation
Chr1:mCIP_col_BU_UB"
Chr1	ATIDB	mCIP_col_BU_UB_methylation	113	153	6.0091032e-02	.	.	Name="methylation
Chr1:mCIP_col_BU_UB"
Chr1	ATIDB	mCIP_col_BU_UB_methylation	154	184	4.9909350e-02	.	.	Name="methylation
Chr1:mCIP_col_BU_UB"
Chr1	ATIDB	mCIP_col_BU_UB_methylation	185	218	5.7258270e-01	.	.	Name="methylation
Chr1:mCIP_col_BU_UB"
Chr1	ATIDB	mCIP_col_BU_UB_methylation	219	253	6.7766268e-01	.	.	Name="methylation
Chr1:mCIP_col_BU_UB"

what type of code to apply to display just an image-histogram for a
desired region (3 and 4 columns coordinates)?



Vesko

-- 
------------------------------------------------
Dr. Vesselin Baev
Research Assistant Professor
University of Plovdiv
Dept. Molecular Biology
Bioinformatics Group
Tzar Assen 24
Plovdiv 4000, BULGARIA
+359 32 261 (560)
+359 89 43 80 945
Skype: vebaev
vebaev at gmail.com
baev at uni-plovdiv.bg
http://plantgene.eu/


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